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An Information Portal to 110071 Biological Macromolecular Structures

Crystal structure of the 46kDa domain of human cardiac troponin in the Ca2+ saturated form
Sequence Clustering and Redundancy Reduction Results
1J1D
Sequence Clusters for the Sequence Entities in PDB 1J1D
Entity #1: Chains: A,D - Troponin C protein, length: 161 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 3 12266
95% 2 9 5088
90% 2 9 5096
70% 12 25 1352
50% 117 189 95
40% 157 303 25
30% 174 328 30
Entity #2: Chains: B,E - Troponin T protein, length: 106 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 2 18879
95% 1 2 16280
90% 1 2 15874
70% 1 2 14735
50% 1 4 8826
40% 1 4 8041
30% 1 4 7065
Entity #3: Chains: C,F - Troponin I protein, length: 133 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 36203
95% 1 1 27330
90% 1 1 26264
70% 1 1 23639
50% 1 4 4748
40% 1 4 4456
30% 1 4 4038
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.