Sequence Similarity Clusters for the Entities in PDB 1J1D

Entity #1 | Chains: A,D
Troponin C protein, length: 161 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 4 12241
95 % 3 10 5412
90 % 3 10 5422
70 % 13 26 1533
50 % 129 207 107
40 % 169 325 30
30 % 186 351 43
Entity #2 | Chains: B,E
Troponin T protein, length: 106 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 3 14524
95 % 2 3 13659
90 % 2 3 13407
70 % 2 3 12584
50 % 2 5 8409
40 % 2 5 7721
30 % 2 5 6823
Entity #3 | Chains: C,F
Troponin I protein, length: 133 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 41424
95 % 1 1 31107
90 % 1 1 29796
70 % 1 1 26712
50 % 1 4 5381
40 % 1 4 5060
30 % 1 4 4550

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.