Sequence Similarity Clusters for the Entities in PDB 1J1D

Entity #1 | Chains: A,D
Troponin C protein, length: 161 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 4 11945
95 % 3 10 5289
90 % 3 10 5299
70 % 13 26 1491
50 % 129 205 104
40 % 169 323 30
30 % 186 349 41
Entity #2 | Chains: B,E
Troponin T protein, length: 106 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 3 14200
95 % 2 3 13389
90 % 2 3 13145
70 % 2 3 12351
50 % 2 5 8248
40 % 2 5 7579
30 % 2 5 6711
Entity #3 | Chains: C,F
Troponin I protein, length: 133 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 40652
95 % 1 1 30536
90 % 1 1 29260
70 % 1 1 26251
50 % 1 4 5269
40 % 1 4 4956
30 % 1 4 4469

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.