Sequence Similarity Clusters for the Entities in PDB 1J1D

Entity #1 | Chains: A,D
Troponin C protein, length: 161 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 4 11851
95 % 3 10 5241
90 % 3 10 5251
70 % 13 26 1481
50 % 125 200 106
40 % 165 317 30
30 % 182 343 41
Entity #2 | Chains: B,E
Troponin T protein, length: 106 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 3 14087
95 % 2 3 13301
90 % 2 3 13059
70 % 2 3 12271
50 % 2 5 8196
40 % 2 5 7532
30 % 2 5 6676
Entity #3 | Chains: C,F
Troponin I protein, length: 133 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 40320
95 % 1 1 30294
90 % 1 1 29027
70 % 1 1 26041
50 % 1 4 5231
40 % 1 4 4922
30 % 1 4 4442

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.