Sequence Similarity Clusters for the Entities in PDB 1J1D

Entity #1 | Chains: A,D
Troponin C protein, length: 161 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 4 12637
95 % 3 10 5598
90 % 3 10 5600
70 % 13 26 1586
50 % 130 209 110
40 % 170 329 32
30 % 188 356 47
Entity #2 | Chains: B,E
Troponin T protein, length: 106 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 3 15029
95 % 2 3 14118
90 % 2 3 13861
70 % 2 3 12988
50 % 2 5 8666
40 % 2 5 7934
30 % 2 5 6997
Entity #3 | Chains: C,F
Troponin I protein, length: 133 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 42830
95 % 1 1 32180
90 % 1 1 30807
70 % 1 1 27584
50 % 1 4 5562
40 % 1 4 5207
30 % 1 4 4673

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.