Sequence Similarity Clusters for the Entities in PDB 1J1D

Entity #1 | Chains: A,D
Troponin C protein, length: 161 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 4 11976
95 % 3 10 5305
90 % 3 10 5316
70 % 13 26 1496
50 % 129 206 103
40 % 169 324 30
30 % 186 350 41
Entity #2 | Chains: B,E
Troponin T protein, length: 106 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 3 14230
95 % 2 3 13422
90 % 2 3 13178
70 % 2 3 12384
50 % 2 5 8273
40 % 2 5 7600
30 % 2 5 6726
Entity #3 | Chains: C,F
Troponin I protein, length: 133 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 40736
95 % 1 1 30595
90 % 1 1 29313
70 % 1 1 26300
50 % 1 4 5281
40 % 1 4 4971
30 % 1 4 4477

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.