Sequence Similarity Clusters for the Entities in PDB 1J1D

Entity #1 | Chains: A,D
Troponin C protein, length: 161 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 4 13188
95 % 3 10 5858
90 % 3 10 5853
70 % 13 26 1649
50 % 132 213 112
40 % 173 336 36
30 % 190 363 47
Entity #2 | Chains: B,E
Troponin T protein, length: 106 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 3 15692
95 % 2 3 14730
90 % 2 3 14451
70 % 2 3 13546
50 % 2 5 9045
40 % 2 5 8278
30 % 2 5 7289
Entity #3 | Chains: C,F
Troponin I protein, length: 133 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 44493
95 % 1 1 33437
90 % 1 1 31973
70 % 1 1 28557
50 % 1 4 5800
40 % 1 4 5428
30 % 1 4 4871

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.