Sequence Similarity Clusters for the Entities in PDB 1J1D

Entity #1 | Chains: A,D
Troponin C protein, length: 161 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 3 13025
95 % 2 9 5389
90 % 2 9 5386
70 % 12 25 1428
50 % 120 192 103
40 % 160 307 28
30 % 177 333 32
Entity #2 | Chains: B,E
Troponin T protein, length: 106 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 20069
95 % 1 2 17284
90 % 1 2 16815
70 % 1 2 15543
50 % 1 4 9296
40 % 1 4 8465
30 % 1 4 7420
Entity #3 | Chains: C,F
Troponin I protein, length: 133 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 38351
95 % 1 1 28865
90 % 1 1 27673
70 % 1 1 24833
50 % 1 4 4997
40 % 1 4 4683
30 % 1 4 4230

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.