Sequence Similarity Clusters for the Entities in PDB 1J1D

Entity #1 | Chains: A,D
Troponin C protein, length: 161 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 4 11627
95 % 3 10 5157
90 % 3 10 5169
70 % 13 26 1440
50 % 123 195 109
40 % 163 312 30
30 % 180 338 38
Entity #2 | Chains: B,E
Troponin T protein, length: 106 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 3 13835
95 % 2 3 13083
90 % 2 3 12838
70 % 2 3 12072
50 % 2 5 8052
40 % 2 5 7408
30 % 2 5 6577
Entity #3 | Chains: C,F
Troponin I protein, length: 133 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 39727
95 % 1 1 29862
90 % 1 1 28607
70 % 1 1 25649
50 % 1 4 5153
40 % 1 4 4844
30 % 1 4 4380

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.