POP-OUT | CLOSE

An Information Portal to 107049 Biological Macromolecular Structures

Crystal structure of the 46kDa domain of human cardiac troponin in the Ca2+ saturated form
Sequence Clustering and Redundancy Reduction Results
1J1D
Sequence Clusters for the Sequence Entities in PDB 1J1D
Entity #1: Chains: A,D - Troponin C protein, length: 161 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 3 11901
95% 2 9 4906
90% 2 9 4927
70% 12 25 1318
50% 116 188 68
40% 156 302 22
30% 166 318 29
Entity #2: Chains: B,E - Troponin T protein, length: 106 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 2 18379
95% 1 2 15886
90% 1 2 15480
70% 1 2 14340
50% 1 4 8621
40% 1 4 7858
30% 1 4 6923
Entity #3: Chains: C,F - Troponin I protein, length: 133 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 35122
95% 1 1 26541
90% 1 1 25523
70% 1 1 23035
50% 1 4 4615
40% 1 4 4335
30% 1 4 3932
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.