Sequence Similarity Clusters for the Entities in PDB 1J1D

Entity #1 | Chains: A,D
Troponin C protein, length: 161 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 4 11541
95 % 3 10 5129
90 % 3 10 5139
70 % 13 26 1433
50 % 123 195 108
40 % 163 312 30
30 % 180 338 36
Entity #2 | Chains: B,E
Troponin T protein, length: 106 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 3 13738
95 % 2 3 12981
90 % 2 3 12740
70 % 2 3 11973
50 % 2 5 7997
40 % 2 5 7361
30 % 2 5 6535
Entity #3 | Chains: C,F
Troponin I protein, length: 133 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 39505
95 % 1 1 29704
90 % 1 1 28459
70 % 1 1 25522
50 % 1 4 5126
40 % 1 4 4817
30 % 1 4 4356

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.