Sequence Similarity Clusters for the Entities in PDB 1J1D

Entity #1 | Chains: A,D
Troponin C protein, length: 161 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 4 12459
95 % 3 10 5495
90 % 3 10 5501
70 % 13 26 1562
50 % 130 209 105
40 % 170 329 31
30 % 188 356 44
Entity #2 | Chains: B,E
Troponin T protein, length: 106 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 3 14812
95 % 2 3 13912
90 % 2 3 13660
70 % 2 3 12799
50 % 2 5 8546
40 % 2 5 7826
30 % 2 5 6911
Entity #3 | Chains: C,F
Troponin I protein, length: 133 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 42282
95 % 1 1 31775
90 % 1 1 30436
70 % 1 1 27269
50 % 1 4 5466
40 % 1 4 5130
30 % 1 4 4607

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.