Sequence Similarity Clusters for the Entities in PDB 1J17

Entity #1 | Chains: T
Trypsin II, anionic protein, length: 223 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 28157
95 % 18 36 1365 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 0.6
PDBFlex
90 % 18 36 1391
70 % 456 548 19
50 % 510 699 14
40 % 1035 1721 4
30 % 1109 1871 6

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures