Sequence Similarity Clusters for the Entities in PDB 1J17

Entity #1 | Chains: T
Trypsin II, anionic protein, length: 223 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 26968
95 % 18 36 1408 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 0.6
PDBFlex
90 % 18 36 1431
70 % 461 558 19
50 % 515 710 14
40 % 1115 1885 4
30 % 1121 1899 7

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures