Sequence Similarity Clusters for the Entities in PDB 1J17

Entity #1 | Chains: T
Trypsin II, anionic protein, length: 223 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 26460
95 % 18 36 1292 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 0.6
PDBFlex
90 % 18 36 1319
70 % 437 526 19
50 % 491 677 13
40 % 1001 1669 4
30 % 1075 1811 6

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.