Sequence Similarity Clusters for the Entities in PDB 1J17

Entity #1 | Chains: T
Trypsin II, anionic protein, length: 223 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 27330
95 % 18 36 1325 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 0.6
PDBFlex
90 % 18 36 1353
70 % 438 527 19
50 % 492 678 14
40 % 1012 1685 4
30 % 1086 1834 6

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.