Sequence Similarity Clusters for the Entities in PDB 1J16

Entity #1 | Chains: A
Trypsin II, anionic protein, length: 223 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 28157
95 % 6 36 1365 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 0.6
PDBFlex
90 % 6 36 1391
70 % 217 548 19
50 % 227 699 14
40 % 427 1721 4
30 % 444 1871 6

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures