Sequence Similarity Clusters for the Entities in PDB 1J11

Entity #1 | Chains: A,B,C,D
Beta-amylase protein, length: 516 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 12 1763
95 % 6 14 1888 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.5
PDBFlex
90 % 6 14 1929
70 % 6 14 1943
50 % 6 14 1985
40 % 6 14 1975
30 % 6 14 1887

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1VEM 1 A Beta-amylase 1396 3.2.1.2 | Details
2 1J18 1 A Beta-amylase 1396 3.2.1.2 | Details
3 1B9Z 1 A PROTEIN (BETA-AMYLASE) 1396 3.2.1.2 | Details
4 1VEP 1 A Beta-amylase 1396 3.2.1.2 | Details
5 1VEN 1 A Beta-amylase 1396 3.2.1.2 | Details
6 1J11 1 A, B, C, D Beta-amylase 1396 3.2.1.2 | Details
7 1ITC 1 A Beta-Amylase 1396 3.2.1.2 | Details
8 1J0Y 1 A, B, C, D Beta-amylase 1396 3.2.1.2 | Details
9 1VEO 1 A Beta-amylase 1396 3.2.1.2 | Details
10 1J10 1 A, B, C, D Beta-amylase 1396 3.2.1.2 | Details
11 1J12 1 A, B, C, D Beta-amylase 1396 3.2.1.2 | Details
12 1J0Z 1 A, B, C, D Beta-amylase 1396 3.2.1.2 | Details
13 5BCA 1 A, B, C, D PROTEIN (1,4-ALPHA-D-GLUCAN MALTOHYDROLASE.) 1396 3.2.1.2 | Details
14 1B90 1 A PROTEIN (BETA-AMYLASE) 1396 3.2.1.2 | Details