Sequence Similarity Clusters for the Entities in PDB 1J11

Entity #1 | Chains: A,B,C,D
Beta-amylase protein, length: 516 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 10 1551
95 % 6 14 1739 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.6
PDBFlex
90 % 6 14 1782
70 % 6 14 1801
50 % 6 14 1843
40 % 6 14 1852
30 % 6 14 1792

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures