Sequence Similarity Clusters for the Entities in PDB 1J0Y

Entity #1 | Chains: A,B,C,D
Beta-amylase protein, length: 516 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 12 1686
95 % 8 14 1810 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.6
PDBFlex
90 % 8 14 1849
70 % 8 14 1861
50 % 8 14 1898
40 % 8 14 1892
30 % 8 14 1811

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures