Sequence Similarity Clusters for the Entities in PDB 1J0X

Entity #1 | Chains: O,P,Q,R
glyceraldehyde-3-phosphate dehydrogenase protein, length: 332 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 12310
95 % 7 10 1435 Flexibility: No
Max RMSD: 1.0, Avg RMSD: 0.5
PDBFlex
90 % 7 11 1367
70 % 20 31 490
50 % 89 148 77
40 % 89 148 99
30 % 89 148 111

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures