Sequence Similarity Clusters for the Entities in PDB 1J0X

Entity #1 | Chains: O,P,Q,R
glyceraldehyde-3-phosphate dehydrogenase protein, length: 332 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 12097
95 % 7 10 1415 Flexibility: No
Max RMSD: 1.0, Avg RMSD: 0.5
PDBFlex
90 % 7 11 1347
70 % 20 31 487
50 % 89 148 77
40 % 89 148 98
30 % 89 148 109

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures