Sequence Similarity Clusters for the Entities in PDB 1J0X

Entity #1 | Chains: O,P,Q,R
glyceraldehyde-3-phosphate dehydrogenase protein, length: 332 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 11893
95 % 7 9 1511 Flexibility: No
Max RMSD: 1.0, Avg RMSD: 0.5
PDBFlex
90 % 7 10 1435
70 % 20 30 498
50 % 89 147 75
40 % 89 147 96
30 % 89 147 108

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures