Sequence Similarity Clusters for the Entities in PDB 1J0P

Entity #1 | Chains: A
Cytochrome c3 protein, length: 108 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 37030
95 % 1 13 5144 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.3
PDBFlex
90 % 1 13 5169
70 % 1 19 3020
50 % 1 22 2575
40 % 1 30 1877
30 % 1 36 1450

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1J0P 1 A Cytochrome c3 881
2 2EWK 1 A Cytochrome c3 881
3 2EWI 1 A Cytochrome c3 881
4 2YYX 1 A Cytochrome c3 881
5 2EWU 1 A Cytochrome c3 881
6 1J0O 1 A Cytochrome c3 881
7 2YYW 1 A Cytochrome c3 881
8 1WR5 1 A Cytochrome c3 881
9 2YXC 1 A Cytochrome c3 881
10 2Z47 1 A, B Cytochrome c3 881
11 2FFN 1 A Cytochrome c3 881
12 2CDV 1 A CYTOCHROME C3 881
13 1IT1 1 A cytochrome c3 881