Sequence Similarity Clusters for the Entities in PDB 1J0P

Entity #1 | Chains: A
Cytochrome c3 protein, length: 108 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 37030
95 % 1 13 5144 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.3
PDBFlex
90 % 1 13 5169
70 % 1 19 3020
50 % 1 22 2575
40 % 1 30 1877
30 % 1 36 1450

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1J0P 1 A Cytochrome c3 881
2 2EWK 1 A Cytochrome c3 881
3 2EWI 1 A Cytochrome c3 881
4 2YYX 1 A Cytochrome c3 881
5 2EWU 1 A Cytochrome c3 881
6 1J0O 1 A Cytochrome c3 881
7 2YYW 1 A Cytochrome c3 881
8 1WR5 1 A Cytochrome c3 881
9 2YXC 1 A Cytochrome c3 881
10 2CTH 1 A, B CYTOCHROME C3 881
11 2Z47 1 A, B Cytochrome c3 881
12 1WAD 1 A CYTOCHROME C3 879
13 2FFN 1 A Cytochrome c3 881
14 2CDV 1 A CYTOCHROME C3 881
15 2CYM 1 A CYTOCHROME C3 881
16 1MDV 1 A, B CYTOCHROME C3 881
17 2BPN 1 A CYTOCHROME C3 CYTOCHROME C3, RESIDUES 23-129 881
18 1GX7 3 E CYTOCHROME C3 881
19 1IT1 1 A cytochrome c3 881
20 1QN0 1 A CYTOCHROME C3 CLASS III OF C-TYPE CYTOCHROMES, FULLY REDUCED FORM 879
21 1QN1 1 A CYTOCHROME C3 CLASS III OF C-TYPE CYTOCHROMES, FULLY OXIDISED FORM 879
22 1A2I 1 A CYTOCHROME C3 CLASS III OF C-TYPE CYTOCHROMES, FULLY REDUCED FORM 881