Sequence Similarity Clusters for the Entities in PDB 1J0P

Entity #1 | Chains: A
Cytochrome c3 protein, length: 108 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 36546
95 % 1 13 5069 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.3
PDBFlex
90 % 1 13 5100
70 % 1 19 2971
50 % 1 22 2536
40 % 1 30 1847
30 % 1 36 1429

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures