Sequence Similarity Clusters for the Entities in PDB 1J09

Entity #1 | Chains: A
Glutamyl-tRNA synthetase protein, length: 468 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 9 4415
95 % 1 11 3958 Flexibility: Low
Max RMSD: 2.2, Avg RMSD: 1.1
PDBFlex
90 % 1 11 4024
70 % 1 11 3935
50 % 1 11 3808
40 % 2 22 1487
30 % 3 25 1358

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures