Sequence Similarity Clusters for the Entities in PDB 1J08

Entity #1 | Chains: A,B,C,D,E,F,G,H
glutaredoxin-like protein protein, length: 226 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 9393
95 % 1 1 9585 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.4
PDBFlex
90 % 1 1 9488
70 % 2 2 7784
50 % 2 2 7173
40 % 2 2 6659
30 % 2 4 3829

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures