Sequence Similarity Clusters for the Entities in PDB 1J08

Entity #1 | Chains: A,B,C,D,E,F,G,H
glutaredoxin-like protein protein, length: 226 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 7906
95 % 2 2 7974 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.4
PDBFlex
90 % 2 2 7907
70 % 2 2 7660
50 % 2 2 7039
40 % 2 2 6505
30 % 2 2 5690

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures