Sequence Similarity Clusters for the Entities in PDB 1J05

Entity #1 | Chains: A,L
anti-CEA mAb T84.66, light chain protein, length: 111 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 46087
95 % 1 1 34519 Flexibility: Low
Max RMSD: 0.6, Avg RMSD: 0.6
PDBFlex
90 % 1 1 32995
70 % 5 191 72
50 % 14 305 21
40 % 49 916 5
30 % 57 1042 7
Entity #2 | Chains: B,H
anti-CEA mAb T84.66, heavy chain protein, length: 121 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 45564
95 % 1 1 34114 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.2
PDBFlex
90 % 1 1 32615
70 % 5 82 259
50 % 34 566 7
40 % 50 916 5
30 % 58 1042 7

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.