Sequence Similarity Clusters for the Entities in PDB 1J04

Entity #1 | Chains: A
alanine--glyoxylate aminotransferase protein, length: 392 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 53372
95 % 10 14 1844 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.5
PDBFlex
90 % 10 14 1886
70 % 12 16 1643
50 % 12 16 1675
40 % 17 22 1161
30 % 25 30 681

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.