Sequence Similarity Clusters for the Entities in PDB 1IZL

Entity #1 | Chains: A,J
Photosystem II: Subunit PsbA protein, length: 360 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 11290
95 % 34 35 639
90 % 34 35 665
70 % 35 37 634
50 % 35 37 677
40 % 35 37 721
30 % 35 37 713
Entity #10 | Chains: K,W
Photosystem II: Subunit PsbK protein, length: 37 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 22 22 852
95 % 22 22 1155
90 % 24 24 1085
70 % 25 25 1028
50 % 25 25 1071
40 % 25 25 1083
30 % 25 25 1066
Entity #11 | Chains: O,Y
Photosystem II: Subunit PsbO protein, length: 205 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #12 | Chains: U,Z
Photosystem II: Subunit PsbU protein, length: 97 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #13 | Chains: 0,V
Photosystem II: Subunit PsbV protein, length: 137 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 25 25 754
95 % 25 25 1037
90 % 25 25 1056
70 % 25 25 1094
50 % 26 26 1089
40 % 27 27 1081
30 % 27 27 1062
Entity #14 | Chains: 1,X
Photosystem II: Subunit PsbX protein, length: 25 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: B,L
Photosystem II: Subunit PsbB protein, length: 472 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 30783
95 % 1 1 24997
90 % 1 1 24188
70 % 1 1 22100
50 % 1 1 19145
40 % 1 1 17037
30 % 35 38 693
Entity #3 | Chains: C,M
Photosystem II: Subunit PsbC protein, length: 473 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 30759
95 % 1 1 24989
90 % 1 1 24180
70 % 1 1 22094
50 % 35 37 674
40 % 35 37 717
30 % 36 38 693
Entity #4 | Chains: D,N
Photosystem II: Subunit PsbD protein, length: 352 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 33 34 486
95 % 34 35 640
90 % 35 37 595
70 % 35 37 635
50 % 35 37 678
40 % 35 37 722
30 % 35 37 714
Entity #5 | Chains: E,P
Photosystem II: Subunit PsbE protein, length: 83 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 34 35 465
95 % 34 35 651
90 % 34 35 676
70 % 34 35 727
50 % 35 37 686
40 % 35 37 726
30 % 35 37 720
Entity #6 | Chains: F,Q
Photosystem II: Subunit PsbF protein, length: 44 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 28 29 632
95 % 28 29 850
90 % 28 29 884
70 % 28 29 914
50 % 29 30 897
40 % 29 30 927
30 % 29 30 905
Entity #7 | Chains: G,R
Photosystem II: Subunit PsbG protein, length: 220 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #8 | Chains: H,S
Photosystem II: Subunit PsbH protein, length: 33 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #9 | Chains: I,T
Photosystem II: Subunit PsbI protein, length: 26 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.