Sequence Similarity Clusters for the Entities in PDB 1IYW

Entity #1 | Chains: A,B
Valyl-tRNA Synthetase protein, length: 862 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 10979
95 % 3 3 10960 Flexibility: Medium
Max RMSD: 6.5, Avg RMSD: 3.7
PDBFlex
90 % 3 3 10813
70 % 3 3 10260
50 % 3 3 9291
40 % 3 3 8512
30 % 3 3 7500

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.