Sequence Similarity Clusters for the Entities in PDB 1IYW

Entity #1 | Chains: A,B
Valyl-tRNA Synthetase protein, length: 862 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 11205
95 % 3 3 11162 Flexibility: Medium
Max RMSD: 6.5, Avg RMSD: 3.7
PDBFlex
90 % 3 3 11016
70 % 3 3 10454
50 % 3 3 9465
40 % 3 3 8667
30 % 3 3 7634

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures