Sequence Similarity Clusters for the Entities in PDB 1IYJ

Entity #1 | Chains: A,C
Deleted in split hand/split foot protein 1 protein, length: 70 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 18 2309
95 % 3 18 2963 Flexibility: Low
Max RMSD: 5.5, Avg RMSD: 2.7
PDBFlex
90 % 3 18 3009
70 % 3 18 2983
50 % 3 18 2940
40 % 3 18 2903
30 % 3 18 2714
Entity #2 | Chains: B,D
breast cancer susceptibility protein, length: 817 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 30404
95 % 1 1 25187 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.3
PDBFlex
90 % 2 2 20537
70 % 2 2 18861
50 % 2 2 16406
40 % 2 2 14656
30 % 2 2 12575

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.