Sequence Similarity Clusters for the Entities in PDB 1IYJ

Entity #1 | Chains: A,C
Deleted in split hand/split foot protein 1 protein, length: 70 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 18 2365
95 % 3 18 3014 Flexibility: Low
Max RMSD: 5.5, Avg RMSD: 2.7
PDBFlex
90 % 3 18 3061
70 % 3 18 3029
50 % 3 18 2976
40 % 3 18 2932
30 % 3 18 2743
Entity #2 | Chains: B,D
breast cancer susceptibility protein, length: 817 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 30792
95 % 1 1 25497
90 % 2 2 20767
70 % 2 2 19071
50 % 2 2 16578
40 % 2 2 14803
30 % 2 2 12704

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures