Sequence Similarity Clusters for the Entities in PDB 1IYJ

Entity #1 | Chains: A,C
Deleted in split hand/split foot protein 1 protein, length: 70 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 22 1867
95 % 3 22 2440 Flexibility: Low
Max RMSD: 5.5, Avg RMSD: 2.7
PDBFlex
90 % 3 22 2505
70 % 3 22 2498
50 % 3 22 2487
40 % 3 22 2457
30 % 3 22 2340
Entity #2 | Chains: B,D
breast cancer susceptibility protein, length: 817 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 31305
95 % 1 1 25872
90 % 2 2 21098
70 % 2 2 19368
50 % 2 2 16828
40 % 2 2 15020
30 % 2 2 12889

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures