Sequence Similarity Clusters for the Entities in PDB 1IYJ

Entity #1 | Chains: A,C
Deleted in split hand/split foot protein 1 protein, length: 70 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 14 2999
95 % 3 14 3741 Flexibility: Low
Max RMSD: 5.5, Avg RMSD: 2.7
PDBFlex
90 % 3 14 3781
70 % 3 14 3729
50 % 3 14 3639
40 % 3 14 3506
30 % 3 14 3282
Entity #2 | Chains: B,D
breast cancer susceptibility protein, length: 817 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 29850
95 % 1 1 24704 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.3
PDBFlex
90 % 2 2 20151
70 % 2 2 18561
50 % 2 2 16158
40 % 2 2 14442
30 % 2 2 12391

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.