Sequence Similarity Clusters for the Entities in PDB 1IYD

Entity #1 | Chains: A,B,C
BRANCHED-CHAIN AMINO ACID AMINOTRANSFERASE protein, length: 309 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 6 3467
95 % 3 6 3810 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.4
PDBFlex
90 % 3 6 3881
70 % 3 6 3800
50 % 3 6 3700
40 % 23 28 651
30 % 61 76 300

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures