Sequence Similarity Clusters for the Entities in PDB 1IXS

Entity #1 | Chains: A
Holliday junction DNA helicase ruvA protein, length: 62 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 74979
95 % 1 1 51968
90 % 1 1 49248
70 % 1 1 43144
50 % 1 1 36754
40 % 1 1 32350
30 % 1 1 27298
Entity #2 | Chains: B
RuvB protein, length: 318 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 57391
95 % 1 3 17589
90 % 1 3 17237
70 % 1 3 16025
50 % 9 11 4931
40 % 9 11 4659
30 % 9 11 4275

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures