Sequence Similarity Clusters for the Entities in PDB 1IXS

Entity #1 | Chains: A
Holliday junction DNA helicase ruvA protein, length: 62 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 74059
95 % 1 1 51343
90 % 1 1 48677
70 % 1 1 42662
50 % 1 1 36349
40 % 1 1 31990
30 % 1 1 26992
Entity #2 | Chains: B
RuvB protein, length: 318 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 56646
95 % 1 3 17329
90 % 1 3 16988
70 % 1 3 15809
50 % 9 11 4865
40 % 9 11 4603
30 % 9 11 4218

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures