Sequence Similarity Clusters for the Entities in PDB 1IXR

Entity #1 | Chains: A,B
Holliday junction DNA helicase ruvA protein, length: 191 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 42076
95 % 1 1 31917 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 1.0
PDBFlex
90 % 1 1 30532
70 % 1 1 27275
50 % 1 1 23271
40 % 1 1 20481
30 % 9 10 2030
Entity #2 | Chains: C
RuvB protein, length: 312 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 55768
95 % 3 3 16965 Flexibility: Low
Max RMSD: 2.6, Avg RMSD: 2.1
PDBFlex
90 % 3 3 16631
70 % 3 3 15477
50 % 11 11 4759
40 % 11 11 4506
30 % 11 11 4137

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.