Sequence Similarity Clusters for the Entities in PDB 1IXF

Entity #1 | Chains: A
bacteriorhodopsin protein, length: 248 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 67 77 309
95 % 108 120 232 Flexibility: Low
Max RMSD: 2.4, Avg RMSD: 0.7
PDBFlex
90 % 109 121 247
70 % 109 121 279
50 % 123 136 252
40 % 123 136 269
30 % 176 194 171

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.