Sequence Similarity Clusters for the Entities in PDB 1IWP

Entity #1 | Chains: A,L
Glycerol Dehydratase Alpha subunit protein, length: 555 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 16701
95 % 1 2 15454 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.4
PDBFlex
90 % 1 2 15162
70 % 7 10 3006
50 % 7 10 2959
40 % 7 10 2922
30 % 7 10 2739
Entity #2 | Chains: B,E
Glycerol Dehydratase Beta subunit protein, length: 194 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 41648
95 % 1 2 18690 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.5
PDBFlex
90 % 1 2 18212
70 % 1 2 16836
50 % 1 2 14626
40 % 1 2 13030
30 % 1 2 11152
Entity #3 | Chains: G,M
Glycerol Dehydratase Gamma subunit protein, length: 141 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 22745
95 % 1 2 19574 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.5
PDBFlex
90 % 1 2 19045
70 % 1 2 17570
50 % 1 2 15261
40 % 1 2 13593
30 % 1 2 11628

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.