Sequence Similarity Clusters for the Entities in PDB 1IWP

Entity #1 | Chains: A,L
Glycerol Dehydratase Alpha subunit protein, length: 555 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 16413
95 % 1 2 15184 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.4
PDBFlex
90 % 1 2 14895
70 % 7 10 2961
50 % 7 10 2917
40 % 7 10 2878
30 % 7 10 2695
Entity #2 | Chains: B,E
Glycerol Dehydratase Beta subunit protein, length: 194 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 41009
95 % 1 2 18345 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.5
PDBFlex
90 % 1 2 17874
70 % 1 2 16549
50 % 1 2 14391
40 % 1 2 12820
30 % 1 2 10967
Entity #3 | Chains: G,M
Glycerol Dehydratase Gamma subunit protein, length: 141 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 22343
95 % 1 2 19201 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.5
PDBFlex
90 % 1 2 18684
70 % 1 2 17284
50 % 1 2 15027
40 % 1 2 13385
30 % 1 2 11448

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.