Sequence Similarity Clusters for the Entities in PDB 1IWB

Entity #1 | Chains: A,L
DIOL DEHYDRATASE alpha chain protein, length: 554 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 8 3090
95 % 4 8 3834 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.3
PDBFlex
90 % 4 8 3872
70 % 4 10 3006
50 % 4 10 2959
40 % 4 10 2922
30 % 4 10 2739
Entity #2 | Chains: B,E
DIOL DEHYDRATASE beta chain protein, length: 224 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 8 3324
95 % 4 8 4097 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.4
PDBFlex
90 % 4 8 4128
70 % 4 8 4075
50 % 4 8 3937
40 % 4 8 3762
30 % 4 8 3501
Entity #3 | Chains: G,M
DIOL DEHYDRATASE gamma chain protein, length: 173 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 8 3366
95 % 4 8 4136 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.5
PDBFlex
90 % 4 8 4165
70 % 4 8 4111
50 % 4 8 3963
40 % 4 8 3794
30 % 4 8 3534

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.