Sequence Similarity Clusters for the Entities in PDB 1IWB

Entity #1 | Chains: A,L
DIOL DEHYDRATASE alpha chain protein, length: 554 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 8 3045
95 % 4 8 3786 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.3
PDBFlex
90 % 4 8 3824
70 % 4 10 2961
50 % 4 10 2917
40 % 4 10 2878
30 % 4 10 2695
Entity #2 | Chains: B,E
DIOL DEHYDRATASE beta chain protein, length: 224 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 8 3278
95 % 4 8 4046 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.3
PDBFlex
90 % 4 8 4075
70 % 4 8 4006
50 % 4 8 3880
40 % 4 8 3709
30 % 4 8 3447
Entity #3 | Chains: G,M
DIOL DEHYDRATASE gamma chain protein, length: 173 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 8 3318
95 % 4 8 4083 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.5
PDBFlex
90 % 4 8 4110
70 % 4 8 4041
50 % 4 8 3906
40 % 4 8 3740
30 % 4 8 3478

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.