Sequence Similarity Clusters for the Entities in PDB 1IWA

Entity #1 | Chains: A,C,E,G,I,K,M,O
ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit protein, length: 493 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 4471
95 % 5 5 4252
90 % 5 5 4282
70 % 5 7 2170
50 % 34 48 172
40 % 40 57 144
30 % 60 87 115
Entity #2 | Chains: B,D,F,H,J,L,N,P
ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit protein, length: 138 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 9397
95 % 2 2 5927
90 % 5 5 4424
70 % 5 5 4357
50 % 5 6 3213
40 % 5 6 3126
30 % 5 6 2939

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.