Sequence Similarity Clusters for the Entities in PDB 1IVT

Entity #1 | Chains: A
Lamin A/C protein, length: 122 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 38749
95 % 3 3 12436
90 % 3 3 12253
70 % 3 3 11567
50 % 7 7 5162
40 % 7 7 4848
30 % 7 7 4344

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1IFR 1 A Lamin A/C residues 436-552 9606
2 3GEF 1 A, B, C, D Lamin-A/C Lamin A/C globular domain 9606
3 3UMN 1 A, B, C Lamin-B1 Globular Tail Domain, UNP residues 428-550 9606
4 3JT0 1 A, B Lamin-B1 residues 426-558 9606
5 2LLL 1 A Lamin-B2 UNP residues 449-569 9606
6 2KPW 1 A Lamin-B1 sequence database residues 439-549 9606
7 1IVT 1 A Lamin A/C C-terminal domain 9606