Sequence Similarity Clusters for the Entities in PDB 1IVS

Entity #1 | Chains: C,D
tRNA (Val) rna, length: 75 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: A,B
Valyl-tRNA synthetase protein, length: 862 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 3 11138
95 % 2 3 11102
90 % 2 3 10955
70 % 2 3 10398
50 % 2 3 9417
40 % 2 3 8621
30 % 2 3 7595

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures