Sequence Similarity Clusters for the Entities in PDB 1IVP

Entity #1 | Chains: A,B
HIV-2 PROTEASE protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 8 3923
95 % 17 19 1308 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 0.6
PDBFlex
90 % 17 19 1333
70 % 24 26 1125
50 % 662 706 5
40 % 672 716 8
30 % 674 718 11

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures