Sequence Similarity Clusters for the Entities in PDB 1IVP

Entity #1 | Chains: A,B
HIV-2 PROTEASE protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 6 8 3535
95 % 17 19 1276
90 % 17 19 1306
70 % 24 26 1086
50 % 658 702 5
40 % 668 712 9
30 % 670 714 14

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures