Sequence Similarity Clusters for the Entities in PDB 1IVO

Entity #1 | Chains: A,B
Epidermal Growth Factor Receptor protein, length: 622 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 31963
95 % 10 12 5284 Flexibility: High
Max RMSD: 25.7, Avg RMSD: 10.9
PDBFlex
90 % 10 12 5326
70 % 10 12 5483
50 % 10 12 5303
40 % 31 37 1276
30 % 31 37 1310
Entity #2 | Chains: C,D
Epidermal growth factor protein, length: 53 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 5 11436
95 % 3 6 9297 Flexibility: Low
Max RMSD: 4.1, Avg RMSD: 2.1
PDBFlex
90 % 3 6 9253
70 % 3 5 11757
50 % 3 13 5031
40 % 3 13 4915
30 % 3 13 4697

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures