Sequence Similarity Clusters for the Entities in PDB 1IVO

Entity #1 | Chains: A,B
Epidermal Growth Factor Receptor protein, length: 622 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 6 9928
95 % 8 10 5244 Flexibility: High
Max RMSD: 25.1, Avg RMSD: 10.8
PDBFlex
90 % 8 10 5266
70 % 8 10 5196
50 % 8 10 4956
40 % 32 37 983
30 % 32 37 955
Entity #2 | Chains: C,D
Epidermal growth factor protein, length: 53 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 5 9848
95 % 3 6 8022
90 % 3 6 7979
70 % 3 6 7723
50 % 5 22 2221
40 % 5 22 2211
30 % 5 22 2111

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.