Sequence Similarity Clusters for the Entities in PDB 1IVF

Entity #1 | Chains: A,B
INFLUENZA A SUBTYPE N2 NEURAMINIDASE protein, length: 388 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 10 3024
95 % 10 17 1715 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.4
PDBFlex
90 % 10 18 1528
70 % 12 27 968
50 % 94 147 183
40 % 94 147 200
30 % 106 170 150

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures