Sequence Similarity Clusters for the Entities in PDB 1IVD

Entity #1 | Chains: A,B
INFLUENZA A SUBTYPE N2 NEURAMINIDASE protein, length: 388 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 11 3598
95 % 7 17 1917 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.4
PDBFlex
90 % 7 18 1676
70 % 9 29 1027
50 % 94 165 180
40 % 94 165 191
30 % 101 188 156

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures