Sequence Similarity Clusters for the Entities in PDB 1IVD

Entity #1 | Chains: A,B
INFLUENZA A SUBTYPE N2 NEURAMINIDASE protein, length: 388 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 11 3421
95 % 7 17 1820 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.4
PDBFlex
90 % 7 18 1586
70 % 9 29 987
50 % 87 158 186
40 % 87 158 195
30 % 94 181 153

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures