Sequence Similarity Clusters for the Entities in PDB 1IVD

Entity #1 | Chains: A,B
INFLUENZA A SUBTYPE N2 NEURAMINIDASE protein, length: 388 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 11 3690
95 % 7 17 1966 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.4
PDBFlex
90 % 8 19 1533
70 % 10 30 968
50 % 98 170 180
40 % 98 170 193
30 % 105 193 159

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures