Sequence Similarity Clusters for the Entities in PDB 1ITZ

Entity #1 | Chains: A,B,C
Transketolase protein, length: 675 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 25159
95 % 1 1 21433 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.1
PDBFlex
90 % 1 1 20828
70 % 1 1 19123
50 % 26 34 869
40 % 30 38 851
30 % 30 38 833

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures