Sequence Similarity Clusters for the Entities in PDB 1ITV

Entity #1 | Chains: A,B
MMP9 protein, length: 195 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 43413
95 % 1 1 32875 Flexibility: Low
Max RMSD: 0.7, Avg RMSD: 0.7
PDBFlex
90 % 1 1 31412
70 % 1 1 28016
50 % 1 1 23864
40 % 1 1 20996
30 % 1 1 17773

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures