Sequence Similarity Clusters for the Entities in PDB 1ITV

Entity #1 | Chains: A,B
MMP9 protein, length: 195 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 41603
95 % 1 1 31582 Flexibility: Low
Max RMSD: 0.7, Avg RMSD: 0.7
PDBFlex
90 % 1 1 30213
70 % 1 1 27009
50 % 1 1 23044
40 % 1 1 20279
30 % 1 1 17177

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.