Sequence Similarity Clusters for the Entities in PDB 1ITV

Entity #1 | Chains: A,B
MMP9 protein, length: 195 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 42129
95 % 1 1 31977 Flexibility: Low
Max RMSD: 0.7, Avg RMSD: 0.7
PDBFlex
90 % 1 1 30574
70 % 1 1 27293
50 % 1 1 23283
40 % 1 1 20484
30 % 1 1 17347

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures