Sequence Similarity Clusters for the Entities in PDB 1ITO

Entity #1 | Chains: A
Cathepsin B protein, length: 256 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 9 7468
95 % 8 10 7230 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.2
PDBFlex
90 % 8 10 7217
70 % 16 21 2041
50 % 19 25 1654
40 % 19 25 1668
30 % 210 280 115

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures