Sequence Similarity Clusters for the Entities in PDB 1IS7

Entity #1 | Chains: A,B,C,D,E,F,G,H,I,J
GTP Cyclohydrolase I protein, length: 230 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 1335
95 % 3 3 1811 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.8
PDBFlex
90 % 3 3 1854
70 % 3 3 1874
50 % 3 3 1891
40 % 3 3 1896
30 % 3 3 1829
Entity #2 | Chains: K,L,M,N,O,P,Q,R,S,T
GTP Cyclohydrolase I Feedback Regulatory Protein protein, length: 84 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 4 1099
95 % 4 4 1496 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.4
PDBFlex
90 % 4 4 1521
70 % 4 4 1550
50 % 4 4 1593
40 % 4 4 1617
30 % 4 4 1584

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.