Sequence Similarity Clusters for the Entities in PDB 1IS7

Entity #1 | Chains: A,B,C,D,E,F,G,H,I,J
GTP Cyclohydrolase I protein, length: 230 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 1656
95 % 3 3 1960 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.8
PDBFlex
90 % 3 3 2002
70 % 3 3 2016
50 % 3 3 2043
40 % 3 3 2018
30 % 3 3 1921
Entity #2 | Chains: K,L,M,N,O,P,Q,R,S,T
GTP Cyclohydrolase I Feedback Regulatory Protein protein, length: 84 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 4 1427
95 % 4 4 1685 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.4
PDBFlex
90 % 4 4 1721
70 % 4 4 1734
50 % 4 4 1756
40 % 4 4 1747
30 % 4 4 1709

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures