Sequence Similarity Clusters for the Entities in PDB 1IRU

Entity #1 | Chains: A,O
20S proteasome protein, length: 246 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 13 22 836
95 % 14 26 860
90 % 14 26 896
70 % 14 26 930
50 % 246 269 45
40 % 246 270 49
30 % 1723 1908 3
Entity #10 | Chains: J,X
20S proteasome protein, length: 205 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 38467
95 % 14 26 866
90 % 14 26 901
70 % 14 26 934
50 % 246 269 46
40 % 246 270 50
30 % 246 270 69
Entity #11 | Chains: K,Y
20S proteasome protein, length: 201 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 13 22 841
95 % 14 26 867
90 % 14 26 902
70 % 14 26 935
50 % 14 26 980
40 % 245 269 53
30 % 245 269 70
Entity #12 | Chains: L,Z
20S proteasome protein, length: 204 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 13 14 1258
95 % 14 16 1301
90 % 14 16 1325
70 % 240 249 25
50 % 240 250 52
40 % 240 250 62
30 % 506 542 12
Entity #13 | Chains: 1,M
20S proteasome protein, length: 213 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 13 14 1254
95 % 14 18 1145
90 % 14 18 1169
70 % 14 18 1218
50 % 14 18 1264
40 % 246 269 52
30 % 246 270 68
Entity #14 | Chains: 2,N
20S proteasome protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 37378
95 % 14 18 1142
90 % 14 18 1166
70 % 14 18 1216
50 % 14 18 1263
40 % 246 261 55
30 % 246 261 74
Entity #2 | Chains: B,P
20S proteasome protein, length: 233 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 13 22 837
95 % 14 26 863
90 % 14 26 899
70 % 14 26 933
50 % 246 270 40
40 % 988 1097 3
30 % 1724 1908 3
Entity #3 | Chains: C,Q
20S proteasome protein, length: 261 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 13 22 834
95 % 14 26 858
90 % 14 26 894
70 % 14 26 928
50 % 246 270 39
40 % 989 1097 3
30 % 1725 1908 3
Entity #4 | Chains: D,R
20S proteasome protein, length: 248 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 13 22 835
95 % 14 26 859
90 % 14 26 895
70 % 14 26 929
50 % 246 269 44
40 % 990 1097 3
30 % 1726 1908 3
Entity #5 | Chains: E,S
20S proteasome protein, length: 241 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 36135
95 % 14 26 862
90 % 14 26 898
70 % 14 26 932
50 % 246 271 37
40 % 991 1097 3
30 % 1727 1908 3
Entity #6 | Chains: F,T
20S proteasome protein, length: 263 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 13 22 833
95 % 14 26 857
90 % 14 26 893
70 % 14 26 927
50 % 246 269 43
40 % 246 269 51
30 % 1728 1908 3
Entity #7 | Chains: G,U
20S proteasome protein, length: 254 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 13 23 593
95 % 14 27 621
90 % 14 27 648
70 % 14 27 686
50 % 49 63 302
40 % 49 63 328
30 % 1729 1908 3
Entity #8 | Chains: H,V
20S proteasome protein, length: 205 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 13 14 1257
95 % 14 16 1300
90 % 14 16 1324
70 % 14 16 1347
50 % 246 261 48
40 % 246 261 56
30 % 507 542 12
Entity #9 | Chains: I,W
20S proteasome protein, length: 234 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 36444
95 % 14 16 1295
90 % 14 16 1320
70 % 14 16 1344
50 % 246 270 38
40 % 246 270 48
30 % 246 270 67

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.