Sequence Similarity Clusters for the Entities in PDB 1IRU

Entity #1 | Chains: A,O
20S proteasome protein, length: 246 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 13 22 821
95 % 14 26 842
90 % 14 26 877
70 % 14 26 921
50 % 246 269 43
40 % 246 270 48
30 % 1723 1908 3
Entity #10 | Chains: J,X
20S proteasome protein, length: 205 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 37985
95 % 14 26 848
90 % 14 26 884
70 % 14 26 925
50 % 246 269 44
40 % 246 270 49
30 % 246 270 67
Entity #11 | Chains: K,Y
20S proteasome protein, length: 201 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 13 22 826
95 % 14 26 849
90 % 14 26 885
70 % 14 26 926
50 % 14 26 970
40 % 245 269 53
30 % 245 269 68
Entity #12 | Chains: L,Z
20S proteasome protein, length: 204 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 13 14 1241
95 % 14 16 1285
90 % 14 16 1309
70 % 240 249 25
50 % 240 250 51
40 % 240 250 58
30 % 500 536 13
Entity #13 | Chains: 1,M
20S proteasome protein, length: 213 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 13 14 1237
95 % 14 18 1134
90 % 14 18 1157
70 % 14 18 1202
50 % 14 18 1244
40 % 246 269 52
30 % 246 270 66
Entity #14 | Chains: 2,N
20S proteasome protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 36911
95 % 14 18 1131
90 % 14 18 1154
70 % 14 18 1200
50 % 14 18 1243
40 % 246 261 55
30 % 246 261 71
Entity #2 | Chains: B,P
20S proteasome protein, length: 233 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 13 22 822
95 % 14 26 845
90 % 14 26 880
70 % 14 26 924
50 % 246 270 40
40 % 988 1097 3
30 % 1724 1908 3
Entity #3 | Chains: C,Q
20S proteasome protein, length: 261 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 13 22 819
95 % 14 26 840
90 % 14 26 875
70 % 14 26 919
50 % 246 270 39
40 % 989 1097 3
30 % 1725 1908 3
Entity #4 | Chains: D,R
20S proteasome protein, length: 248 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 13 22 820
95 % 14 26 841
90 % 14 26 876
70 % 14 26 920
50 % 246 269 42
40 % 990 1097 3
30 % 1726 1908 3
Entity #5 | Chains: E,S
20S proteasome protein, length: 241 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 35688
95 % 14 26 844
90 % 14 26 879
70 % 14 26 923
50 % 246 271 37
40 % 991 1097 3
30 % 1727 1908 3
Entity #6 | Chains: F,T
20S proteasome protein, length: 263 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 13 22 818
95 % 14 26 839
90 % 14 26 874
70 % 14 26 918
50 % 246 269 41
40 % 246 269 51
30 % 1728 1908 3
Entity #7 | Chains: G,U
20S proteasome protein, length: 254 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 13 23 586
95 % 14 27 595
90 % 14 27 632
70 % 14 27 671
50 % 49 63 298
40 % 49 63 320
30 % 1729 1908 3
Entity #8 | Chains: H,V
20S proteasome protein, length: 205 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 13 14 1240
95 % 14 16 1284
90 % 14 16 1308
70 % 14 16 1331
50 % 246 261 47
40 % 246 261 56
30 % 501 536 13
Entity #9 | Chains: I,W
20S proteasome protein, length: 234 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 35993
95 % 14 16 1278
90 % 14 16 1304
70 % 14 16 1328
50 % 246 270 38
40 % 246 270 47
30 % 246 270 65

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.