Sequence Similarity Clusters for the Entities in PDB 1IRO

Entity #1 | Chains: A
RUBREDOXIN protein, length: 54 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 16 4280
95 % 2 24 1846 Flexibility: No
Max RMSD: 1.1, Avg RMSD: 0.4
PDBFlex
90 % 2 24 1852
70 % 14 68 596
50 % 14 71 619
40 % 14 71 659
30 % 14 71 662

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 5NW3 1 A Rubredoxin 2261
2 2DSX 1 A Rubredoxin 879
3 1YK4 1 A Rubredoxin 29292
4 5OME 1 A Rubredoxin perdeuterated form 2261
5 2PVE 1 A, B, C Rubredoxin 1501
6 2PYA 1 A Rubredoxin 29292
7 1RB9 1 A RUBREDOXIN 881
8 4AR6 1 A RUBREDOXIN REDUCED STATE (FE II) 2261
9 1BRF 1 A PROTEIN (RUBREDOXIN) 2261
10 4AR5 1 A RUBREDOXIN OXIDISED STATE (FE III) 2261
11 5AI3 1 A RUBREDOXIN PERDEUTERATED, 113-CD SUBSTITUTED, CARBOXYLIC DEUTERONS 2261
12 8RXN 1 A RUBREDOXIN 881
13 2PVX 1 A, B, C, D, E, F, G, H Rubredoxin 2261
14 1IRO 1 A RUBREDOXIN OXIDIZED, FE(III) 1501
15 3KYU 1 A Rubredoxin 2261
16 1BQ8 1 A PROTEIN (RUBREDOXIN) EXTRA MET IN N-TERMINUS 2261
17 3KYV 1 A Rubredoxin 2261
18 3KYW 1 A Rubredoxin 2261
19 1IRN 1 A RUBREDOXIN ZN-SUBSTITUTED 1501
20 4RXN 1 A RUBREDOXIN 1501
21 1BQ9 1 A PROTEIN (RUBREDOXIN) 2261
22 1RDG 1 A RUBREDOXIN 879
23 6RXN 1 A RUBREDOXIN 876
24 7RXN 1 A RUBREDOXIN 881
25 1SMM 1 A Rubredoxin 1501
26 1SMW 1 A Rubredoxin 1501
27 1R0I 1 A Rubredoxin 1501
28 1SMU 1 A Rubredoxin 1501
29 1B13 1 A PROTEIN (RUBREDOXIN) 1501
30 1FHM 1 A RUBREDOXIN REDUCED 1501
31 1IU5 1 A rubredoxin 2261
32 1R0G 1 A Rubredoxin 1501
33 1T9P 1 A, B, C Rubredoxin 1501
34 1FHH 1 A RUBREDOXIN OXIDIZED 1501
35 1R0F 1 A Rubredoxin 1501
36 1C09 1 A, B, C RUBREDOXIN 1501
37 1B2J 1 A PROTEIN (RUBREDOXIN) 1501
38 1R0H 1 A Rubredoxin 1501
39 1BE7 1 A RUBREDOXIN 1501
40 3KYX 1 A Rubredoxin 2261
41 3KYY 1 A Rubredoxin 2261
42 1YK5 1 A, B, C, D Rubredoxin 29292
43 1CAA 1 A RUBREDOXIN 2261
44 1CAD 1 A RUBREDOXIN 2261
45 2RDV 1 A, B, C RUBREDOXIN 881
46 1T9Q 1 A Rubredoxin 1501
47 1B2O 1 A, B PROTEIN (RUBREDOXIN) 1501
48 1T9O 1 A, B, C Rubredoxin 1501
49 1RDV 1 A RUBREDOXIN 881
50 1R0J 1 A Rubredoxin 1501
51 2V3B 2 B RUBREDOXIN 2 287
52 5AI2 1 A RUBREDOXIN PERDEUTERATED, 113-CD SUBSTITUTED, CARBOXYLIC DEUTERONS 2261
53 4K9F 1 A Rubredoxin 2261
54 2M4Y 1 A Rubredoxin 1809
55 4AR3 1 A RUBREDOXIN OXIDISED, FE (III) STATE, HYDRONIUM IONS, CARBOXYLIC DEUTERONS 2261
56 4AR4 1 A RUBREDOXIN REDUCED STATE (FE II), HYDRONIUM IONS, CARBOXYLIC DEUTERONS 2261
57 3SS2 1 A Rubredoxin 2261
58 3RZT 1 A Rubredoxin 2261
59 3RYG 1 A Rubredoxin 2261
60 3RZ6 1 A Rubredoxin 2261
61 2KKD 1 A Rubredoxin 881
62 2QL0 1 A Rubredoxin 882
63 1SPW 1 A Rubredoxin 879
64 1VCX 1 A Rubredoxin 2261
65 1RWD 1 A Rubredoxin 2261
66 1IU6 1 A rubredoxin 2261
67 1E8J 1 A RUBREDOXIN IRON-SULFUR-PROTEIN, ZINC SUBSTITUTED 879
68 1QCV 1 A PROTEIN (RUBREDOXIN VARIANT PFRD-XC4) 2261
69 1BFY 1 A RUBREDOXIN REDUCED CLOSTRIDIUM PASTEURIANUM RUBREDOXIN 1501 1.18.1.1 | Details
70 1ZRP 1 A RUBREDOXIN 2261
71 5RXN 1 A RUBREDOXIN 1501