Sequence Similarity Clusters for the Entities in PDB 1IRM

Entity #1 | Chains: A,B,C
apo heme oxygenase-1 protein, length: 267 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 23 25 1563
95 % 24 26 1894 Flexibility: No
Max RMSD: 1.4, Avg RMSD: 0.5
PDBFlex
90 % 24 26 1939
70 % 24 27 1658
50 % 24 27 1701
40 % 24 27 1711
30 % 24 27 1673

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures