Sequence Similarity Clusters for the Entities in PDB 1IRD

Entity #1 | Chains: A
Hemoglobin alpha chain protein, length: 141 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 222 22
95 % 3 250 19
90 % 3 251 20
70 % 3 332 14
50 % 4 754 4
40 % 4 759 8
30 % 68 1214 8
Entity #2 | Chains: B
Hemoglobin beta chain protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 169 50
95 % 2 250 18
90 % 2 255 19
70 % 2 346 11
50 % 5 754 4
40 % 5 759 8
30 % 69 1214 8

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures