Sequence Similarity Clusters for the Entities in PDB 1IRA

Entity #1 | Chains: X
INTERLEUKIN-1 RECEPTOR ANTAGONIST protein, length: 152 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 5 9446
95 % 3 5 9607 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 1.1
PDBFlex
90 % 3 5 9498
70 % 3 5 9069
50 % 3 5 8199
40 % 8 10 4340
30 % 42 50 1020
Entity #2 | Chains: Y
INTERLEUKIN-1 RECEPTOR protein, length: 319 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 5 12129
95 % 3 5 11831 Flexibility: Low
Max RMSD: 3.4, Avg RMSD: 2.1
PDBFlex
90 % 3 5 11664
70 % 3 5 11026
50 % 3 5 9903
40 % 3 5 9017
30 % 3 5 7900

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.