Sequence Similarity Clusters for the Entities in PDB 1IRA

Entity #1 | Chains: X
INTERLEUKIN-1 RECEPTOR ANTAGONIST protein, length: 152 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 5 9167
95 % 3 5 9318
90 % 3 5 9218
70 % 3 5 8790
50 % 3 5 7946
40 % 8 10 4200
30 % 42 50 989
Entity #2 | Chains: Y
INTERLEUKIN-1 RECEPTOR protein, length: 319 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 5 11735
95 % 3 5 11449 Flexibility: Medium
Max RMSD: 19.5, Avg RMSD: 8.5
PDBFlex
90 % 3 5 11290
70 % 3 5 10662
50 % 3 5 9602
40 % 3 5 8740
30 % 3 5 7649

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.