Sequence Similarity Clusters for the Entities in PDB 1IR2

Entity #1 | Chains: A,B,C,D,E,F,G,H,S,T,U,V,W,X,Y,Z
Large subunit of Rubisco protein, length: 475 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 4 971
95 % 3 13 314
90 % 7 33 157
70 % 8 40 153
50 % 8 46 166
40 % 8 55 139
30 % 11 81 116
Entity #2 | Chains: 1,2,3,4,5,6,7,8,I,J,K,L,M,N,O,P
Small subunit of Rubisco protein, length: 140 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 3174
95 % 3 11 373
90 % 3 11 401
70 % 3 13 380
50 % 7 33 217
40 % 8 38 202
30 % 8 38 213

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.