Sequence Similarity Clusters for the Entities in PDB 1IR1

Entity #1 | Chains: A,B,C,D
Large subunit of Rubisco protein, length: 475 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 4 2243
95 % 2 10 934
90 % 6 33 164
70 % 7 40 162
50 % 7 46 171
40 % 7 55 143
30 % 9 84 117
Entity #2 | Chains: S,T,U,V
Small subunit of Rubisco protein, length: 123 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 22297
95 % 1 1 19097
90 % 2 10 978
70 % 4 20 582
50 % 6 33 225
40 % 7 38 211
30 % 7 38 221

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.