Sequence Similarity Clusters for the Entities in PDB 1IQW

Entity #1 | Chains: L
ANTIBODY M-HFE7A, LIGHT CHAIN protein, length: 218 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 60181
95 % 3 10 5129 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 1.2
PDBFlex
90 % 28 99 154
70 % 901 2327 1
50 % 1846 4713 1
40 % 1846 4713 1
30 % 2088 5567 1
Entity #2 | Chains: H
ANTIBODY M-HFE7A, HEAVY CHAIN protein, length: 230 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 59343
95 % 1 1 41792
90 % 5 29 868
70 % 890 2280 2
50 % 1847 4713 1
40 % 1847 4713 1
30 % 2089 5567 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.