Sequence Similarity Clusters for the Entities in PDB 1IQW

Entity #1 | Chains: L
ANTIBODY M-HFE7A, LIGHT CHAIN protein, length: 218 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 66532
95 % 4 11 3981 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 1.2
PDBFlex
90 % 32 108 147
70 % 985 2516 1
50 % 2019 5101 1
40 % 2330 5750 1
30 % 2846 7168 1
Entity #2 | Chains: H
ANTIBODY M-HFE7A, HEAVY CHAIN protein, length: 230 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 66533
95 % 1 1 53846
90 % 10 37 929
70 % 976 2475 2
50 % 2020 5101 1
40 % 2331 5750 1
30 % 2847 7168 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures