Sequence Similarity Clusters for the Entities in PDB 1IQN

Entity #1 | Chains: A
coagulation Factor Xa protein, length: 235 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 99 119 211
95 % 112 134 250 Flexibility: No
Max RMSD: 2.3, Avg RMSD: 0.5
PDBFlex
90 % 112 134 265
70 % 112 135 292
50 % 634 678 14
40 % 1483 1685 4
30 % 1601 1834 6
Entity #2 | Chains: L
coagulation Factor Xa protein, length: 96 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 14 25 1298
95 % 14 26 1657
90 % 14 26 1692
70 % 14 26 1715
50 % 14 26 1756
40 % 16 31 1469
30 % 16 31 1445

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.