Sequence Similarity Clusters for the Entities in PDB 1IQL

Entity #1 | Chains: A
coagulation Factor Xa protein, length: 235 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 108 119 208
95 % 121 134 245
90 % 121 134 259
70 % 121 135 286
50 % 648 677 13
40 % 1552 1679 4
30 % 1680 1827 6
Entity #2 | Chains: L
coagulation Factor Xa protein, length: 96 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 18 25 1272
95 % 18 26 1616 Flexibility: Low
Max RMSD: 4.4, Avg RMSD: 1.1
PDBFlex
90 % 18 26 1650
70 % 18 26 1672
50 % 18 26 1708
40 % 20 31 1442
30 % 20 31 1418

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.