Sequence Similarity Clusters for the Entities in PDB 1IQL

Entity #1 | Chains: A
coagulation Factor Xa protein, length: 235 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 108 119 220
95 % 121 134 262 Flexibility: No
Max RMSD: 2.3, Avg RMSD: 0.5
PDBFlex
90 % 121 134 276
70 % 121 135 313
50 % 669 699 14
40 % 1593 1721 4
30 % 1722 1871 6
Entity #2 | Chains: L
coagulation Factor Xa protein, length: 96 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 18 25 1355
95 % 18 26 1721
90 % 18 26 1762
70 % 18 26 1780
50 % 18 26 1825
40 % 20 31 1512
30 % 20 31 1483

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures