Sequence Similarity Clusters for the Entities in PDB 1IQL

Entity #1 | Chains: A
coagulation Factor Xa protein, length: 235 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 108 119 213
95 % 121 134 254 Flexibility: No
Max RMSD: 2.3, Avg RMSD: 0.5
PDBFlex
90 % 121 134 268
70 % 121 135 298
50 % 654 683 14
40 % 1568 1695 4
30 % 1697 1845 6
Entity #2 | Chains: L
coagulation Factor Xa protein, length: 96 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 18 25 1319
95 % 18 26 1671
90 % 18 26 1707
70 % 18 26 1732
50 % 18 26 1774
40 % 20 31 1478
30 % 20 31 1454

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.