Sequence Similarity Clusters for the Entities in PDB 1IQK

Entity #1 | Chains: A
coagulation Factor Xa protein, length: 235 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 116 119 207
95 % 129 134 242 Flexibility: No
Max RMSD: 2.3, Avg RMSD: 0.5
PDBFlex
90 % 129 134 255
70 % 130 135 283
50 % 659 677 13
40 % 1575 1669 4
30 % 1705 1811 6
Entity #2 | Chains: L
coagulation Factor Xa protein, length: 96 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 23 25 1246
95 % 23 26 1584
90 % 23 26 1619
70 % 23 26 1655
50 % 23 26 1702
40 % 26 31 1439
30 % 26 31 1411

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.