Sequence Similarity Clusters for the Entities in PDB 1IQG

Entity #1 | Chains: A
coagulation Factor Xa protein, length: 235 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 96 119 217
95 % 109 134 259 Flexibility: No
Max RMSD: 2.3, Avg RMSD: 0.5
PDBFlex
90 % 109 134 273
70 % 109 135 309
50 % 633 683 14
40 % 1476 1703 4
30 % 1594 1853 6
Entity #2 | Chains: L
coagulation Factor Xa protein, length: 96 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 13 25 1335
95 % 13 26 1685 Flexibility: Low
Max RMSD: 4.4, Avg RMSD: 1.2
PDBFlex
90 % 13 26 1725
70 % 13 26 1749
50 % 13 26 1797
40 % 15 31 1493
30 % 15 31 1463

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures