Sequence Similarity Clusters for the Entities in PDB 1IQA

Entity #1 | Chains: A,B,C
RECEPTOR ACTIVATOR OF NUCLEAR FACTOR KAPPA B LIGAND protein, length: 160 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 7 4086
95 % 2 7 4871 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 1.1
PDBFlex
90 % 2 9 4236
70 % 2 9 4168
50 % 2 9 4008
40 % 2 9 3837
30 % 4 15 1686

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures