Sequence Similarity Clusters for the Entities in PDB 1IPP

Entity #1 | Chains: C,D
DNA (5'-D(*TP*TP*GP*AP*CP*TP*CP*TP*CP*TP*TP*AP*AP*GP*AP*GP*AP*GP*TP*CP*A)-3') dna, length: 21 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: A,B
INTRON-ENCODED ENDONUCLEASE I-PPOI protein, length: 163 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 5 5946
95 % 5 8 3291
90 % 5 8 3338
70 % 5 8 3292
50 % 5 8 3216
40 % 5 8 3115
30 % 5 8 2904

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.